{
  "_id": "6a6332dcd3420cf5dfdb8866",
  "Package": "backbone",
  "Type": "Package",
  "Title": "Extracts the Backbone from Networks",
  "Version": "3.0.4",
  "Authors@R": "c(\nperson(\"Zachary\", \"Neal\", email = \"zpneal@msu.edu\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-3076-4995\")),\nperson(\"Rachel\", \"Domagalski\", role = \"ctb\"),\nperson(\"Bruce\", \"Sagan\", role = \"ctb\"),\nperson(\"Karl\", \"Godard\", role = \"ctb\"))",
  "Description": "An implementation of methods for extracting a sparse\nunweighted network (i.e. a backbone) from an unweighted network\n(e.g., Hamann et al., 2016 <doi:10.1007/s13278-016-0332-2>), a\nweighted network (e.g., Serrano et al., 2009\n<doi:10.1073/pnas.0808904106>), or a weighted projection (e.g.,\nNeal et al., 2021 <doi:10.1038/s41598-021-03238-3>).",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.2",
  "Roxygen": "list(markdown = TRUE)",
  "VignetteBuilder": "knitr",
  "URL": "https://rbackbone.net",
  "BugReports": "https://github.com/zpneal/backbone/issues",
  "LazyData": "true",
  "Config/pak/sysreqs": "libglpk-dev libxml2-dev",
  "Repository": "https://zpneal.r-universe.dev",
  "Date/Publication": "2026-05-21 12:42:24 UTC",
  "RemoteUrl": "https://github.com/zpneal/backbone",
  "RemoteRef": "HEAD",
  "RemoteSha": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-07-24 07:44:42 UTC",
    "User": "root"
  },
  "Author": "Zachary Neal [aut, cre] (ORCID:\n<https://orcid.org/0000-0003-3076-4995>),\nRachel Domagalski [ctb],\nBruce Sagan [ctb],\nKarl Godard [ctb]",
  "Maintainer": "Zachary Neal <zpneal@msu.edu>",
  "_user": "zpneal",
  "_type": "src",
  "_file": "backbone_3.0.4.tar.gz",
  "_fileid": "https://r2.ropensci.org/de66603182cd444674c783a933063fbbf501a32d827ab72c988d9063bb879d1a",
  "_filesize": 5495209,
  "_sha256": "de66603182cd444674c783a933063fbbf501a32d827ab72c988d9063bb879d1a",
  "_expires": "2026-11-01T09:39:38.000Z",
  "_created": "2026-07-24T07:44:42.000Z",
  "_published": "2026-07-24T09:39:40.751Z",
  "_jobs": [
    {
      "job": 89428297107,
      "time": 129,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8590102166"
    },
    {
      "job": 89428297065,
      "time": 152,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8590109802"
    },
    {
      "job": 89428297111,
      "time": 134,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8590102831"
    },
    {
      "job": 89428297073,
      "time": 156,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8590111176"
    },
    {
      "job": 89428297099,
      "time": 151,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8592551489"
    },
    {
      "job": 89428297076,
      "time": 398,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8592667328"
    },
    {
      "job": 89428297082,
      "time": 178,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8592603271"
    },
    {
      "job": 89428297128,
      "time": 235,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8592609214"
    },
    {
      "job": 89427725204,
      "time": 192,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8590052673"
    },
    {
      "job": 89428297047,
      "time": 134,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8590102259"
    },
    {
      "job": 89428297077,
      "time": 121,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8590098971"
    },
    {
      "job": 89428297093,
      "time": 99,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8590090135"
    },
    {
      "job": 89428297067,
      "time": 101,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8590091426"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790",
  "_status": "success",
  "_upstream": "https://github.com/zpneal/backbone",
  "_commit": {
    "id": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
    "author": "zpneal <zpneal@msu.edu>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #56 from zpneal/devel\n\nDevel",
    "time": 1779367344
  },
  "_maintainer": {
    "name": "Zachary Neal",
    "email": "zpneal@msu.edu",
    "login": "zpneal",
    "description": "",
    "uuid": 68908166,
    "orcid": "0000-0003-3076-4995"
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "graphics",
      "role": "Imports"
    },
    {
      "package": "igraph",
      "role": "Imports"
    },
    {
      "package": "Matrix",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "tinytest",
      "role": "Suggests"
    }
  ],
  "_owner": "zpneal",
  "_selfowned": true,
  "_usedby": 2,
  "_updates": [
    {
      "week": "2025-32",
      "n": 1
    },
    {
      "week": "2025-38",
      "n": 12
    },
    {
      "week": "2025-40",
      "n": 1
    },
    {
      "week": "2025-41",
      "n": 1
    },
    {
      "week": "2025-50",
      "n": 1
    },
    {
      "week": "2026-21",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "c3.0.0",
      "date": "2025-09-17"
    },
    {
      "name": "v3.0.1",
      "date": "2025-10-01"
    },
    {
      "name": "v3.0.2",
      "date": "2025-10-06"
    },
    {
      "name": "v3.0.4",
      "date": "2026-05-21"
    }
  ],
  "_stars": 48,
  "_contributors": [
    {
      "user": "zpneal",
      "count": 514,
      "uuid": 68908166
    },
    {
      "user": "domagal9",
      "count": 336,
      "uuid": 41343995
    },
    {
      "user": "schochastics",
      "count": 5,
      "uuid": 17147355
    },
    {
      "user": "federicomarini",
      "count": 1,
      "uuid": 7447478
    }
  ],
  "_userbio": {
    "uuid": 68908166,
    "type": "user",
    "name": "zpneal",
    "followers": 22
  },
  "_downloads": {
    "count": 851,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/backbone"
  },
  "_mentions": 1,
  "_devurl": "https://github.com/zpneal/backbone",
  "_searchresults": 46,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/backbone.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/zpneal/backbone",
  "_realowner": "zpneal",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2019-09-19"
    },
    {
      "version": "1.1.0",
      "date": "2019-12-02"
    },
    {
      "version": "1.2.0",
      "date": "2020-05-15"
    },
    {
      "version": "1.2.1",
      "date": "2020-07-03"
    },
    {
      "version": "1.2.2",
      "date": "2020-08-26"
    },
    {
      "version": "1.3.0",
      "date": "2021-02-02"
    },
    {
      "version": "1.3.1",
      "date": "2021-02-16"
    },
    {
      "version": "1.4.0",
      "date": "2021-04-01"
    },
    {
      "version": "1.5.0",
      "date": "2021-06-04"
    },
    {
      "version": "1.5.1",
      "date": "2021-09-17"
    },
    {
      "version": "2.0.0",
      "date": "2021-12-10"
    },
    {
      "version": "2.0.1",
      "date": "2022-03-16"
    },
    {
      "version": "2.0.2",
      "date": "2022-03-18"
    },
    {
      "version": "2.0.3",
      "date": "2022-03-22"
    },
    {
      "version": "2.1.0",
      "date": "2022-06-01"
    },
    {
      "version": "2.1.1",
      "date": "2022-10-18"
    },
    {
      "version": "2.1.2",
      "date": "2023-02-13"
    },
    {
      "version": "2.1.3",
      "date": "2024-01-24"
    },
    {
      "version": "2.1.4",
      "date": "2024-05-09"
    },
    {
      "version": "2.1.5",
      "date": "2025-08-01"
    },
    {
      "version": "3.0.0",
      "date": "2025-09-15"
    },
    {
      "version": "3.0.1",
      "date": "2025-10-03"
    },
    {
      "version": "3.0.2",
      "date": "2025-10-06"
    },
    {
      "version": "3.0.3",
      "date": "2025-12-11"
    },
    {
      "version": "3.0.4",
      "date": "2026-05-20"
    }
  ],
  "_exports": [
    "backbone",
    "backbone_from_projection",
    "backbone_from_unweighted",
    "backbone_from_weighted",
    "bicm",
    "disparity",
    "fastball",
    "fdsm",
    "fixedcol",
    "fixedfill",
    "fixedrow",
    "lans",
    "mlf",
    "sdsm"
  ],
  "_datasets": [
    {
      "name": "senate108",
      "title": "Bill sponsorship in the 108th U.S. Senate",
      "object": "senate108",
      "class": [
        "igraph"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "backbone",
      "title": "Extract the backbone from a network",
      "topics": [
        "backbone"
      ]
    },
    {
      "page": "backbone_from_projection",
      "title": "Extract the backbone from a weighted bipartite or hypgergraph projection",
      "topics": [
        "backbone_from_projection"
      ]
    },
    {
      "page": "backbone_from_unweighted",
      "title": "Extract the backbone from an unweighted, undirected network",
      "topics": [
        "backbone_from_unweighted"
      ]
    },
    {
      "page": "backbone_from_weighted",
      "title": "Extract the backbone from a weighted network",
      "topics": [
        "backbone_from_weighted"
      ]
    },
    {
      "page": "bicm",
      "title": "Bipartite Configuration Model",
      "topics": [
        "bicm"
      ]
    },
    {
      "page": "fastball",
      "title": "Randomize a binary matrix using the fastball algorithm",
      "topics": [
        "fastball"
      ]
    },
    {
      "page": "senate108",
      "title": "Bill sponsorship in the 108th U.S. Senate",
      "topics": [
        "senate108"
      ]
    }
  ],
  "_pkglogo": "https://github.com/zpneal/backbone/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/zpneal/backbone/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "cpp11",
    "glue",
    "igraph",
    "lattice",
    "lifecycle",
    "magrittr",
    "Matrix",
    "pkgconfig",
    "Rcpp",
    "rlang",
    "vctrs"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "senate.Rmd",
      "filename": "senate.html",
      "title": "Empirical Example of Backbone Extraction: The 108^th^ U.S. Senate",
      "author": "Zachary Neal, Michigan State University, zpneal@msu.edu",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Table of Contents",
        "Introduction",
        "Data",
        "Extracting from a weighted projection",
        "Extracting from a weighted network",
        "Extracting from an unweighted network",
        "Lessons",
        "References"
      ],
      "created": "2025-09-17 12:41:22",
      "modified": "2026-05-21 12:42:24",
      "commits": 2
    },
    {
      "source": "backbone.Rmd",
      "filename": "backbone.html",
      "title": "Introduction to Backbone",
      "author": "Zachary Neal, Michigan State University, zpneal@msu.edu",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Table of Contents",
        "Introduction",
        "Welcome",
        "Installing and loading the package",
        "Package overview",
        "Supported data formats",
        "tl;dr (the backbone() wrapper)",
        "Weighted networks",
        "Background",
        "Structural models",
        "Statistical models",
        "Weighted projections",
        "Background [@neal2014backbone]",
        "Statistical models",
        "Unweighted networks",
        "Background",
        "Structural models",
        "Advanced functions",
        "Backbone objects",
        "Signed backbones",
        "Custom backbones",
        "Utility functions",
        "Matrix randomization",
        "Bipartite Configuration Model (BiCM)",
        "References"
      ],
      "created": "2020-05-19 14:48:40",
      "modified": "2026-05-21 12:42:24",
      "commits": 16
    }
  ],
  "_score": 8.377422824544112,
  "_indexed": true,
  "_nocasepkg": "backbone",
  "_universes": [
    "zpneal"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "3.0.4",
      "date": "2026-07-24T07:46:56.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/2c123975fe8156adb5258af91bea95ae62c7c0ba05bd1403439df0bcf902b925",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "3.0.4",
      "date": "2026-07-24T07:47:12.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/1d3d65475aeff6a6a1c0087783ebc1668d3c9535625d3d017fa09b991e4a2587",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "3.0.4",
      "date": "2026-07-24T07:46:58.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/6f81db6db7a28cf1442d9868aea8aad482d644c5d4b6cdb4cc1c37bae0cf6e6c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "3.0.4",
      "date": "2026-07-24T07:47:14.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/8917987644025b0ca9f7ee7b332db764e475951fcae623a04a5b3c5170561c4a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "3.0.4",
      "date": "2026-07-24T09:33:10.000Z",
      "arch": "aarch64",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/cc0160527ffdb6706f2d7c371a3cae60953cbda45dd9719358d9a1cb298bc9c9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "3.0.4",
      "date": "2026-07-24T09:37:08.000Z",
      "arch": "x86_64",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/b68210a4ed2e33247f5f28dddac917cc7015f9bb5127b72d39ba8e458ec7483e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "3.0.4",
      "date": "2026-07-24T09:35:14.000Z",
      "arch": "aarch64",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/1087255670caeabc1957f1ec64016fa1a8380bbf85d32c07a6420f1d2956fea4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "3.0.4",
      "date": "2026-07-24T09:35:10.000Z",
      "arch": "x86_64",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/efa8ae44591c2f08a740ef536a0279f4d228e6429ffe8377f6251f9d7bcadb68",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "3.0.4",
      "date": "2026-07-24T07:47:12.000Z",
      "arch": "emscripten",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/03bfe92b6a7ac72b57f9c54b720e329fa0cfcb11e5d3a3f922c89ee8d5c0f5bd",
      "status": "success",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "3.0.4",
      "date": "2026-07-24T07:46:12.000Z",
      "arch": "x86_64",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/7602fd28c77b7a79dec41128955509cc9dbe1f27a6946276992dffe15349b00d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "3.0.4",
      "date": "2026-07-24T07:45:53.000Z",
      "arch": "x86_64",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/2c1b8b6de6d9286036b06b2f8ec745eac5ace239f2964a1d8bd1b6a637ef8011",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "3.0.4",
      "date": "2026-07-24T07:45:56.000Z",
      "arch": "x86_64",
      "commit": "a6ef2804b34d0d19ab8a01e0f569c6786a4760fe",
      "fileid": "https://r2.ropensci.org/baa9e594a23389cf173445f1102e12d93e8a8e3bc4133ed744aa0ddc2d990a36",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zpneal/actions/runs/30076298790"
    }
  ]
}